From 0a2b4ded7c31ab81cf5a8de25651a3dce558a217 Mon Sep 17 00:00:00 2001
From: many <nyhuis@tfd.uni-hannover.de>
Date: Sat, 12 Oct 2024 22:09:26 +0200
Subject: [PATCH] clean obsolete
---
ntrfc/turbo/profile_tele_extraction.py | 40 --------------------------
1 file changed, 40 deletions(-)
diff --git a/ntrfc/turbo/profile_tele_extraction.py b/ntrfc/turbo/profile_tele_extraction.py
index 9d825771..869a73a5 100644
--- a/ntrfc/turbo/profile_tele_extraction.py
+++ b/ntrfc/turbo/profile_tele_extraction.py
@@ -111,46 +111,6 @@ def voronoi_skeleton_sites(points_2d_closed_refined_voronoi):
return sites_inside_sorted
-def skeletonize_skeleton_sites(points_2d_closed_refined_skeletonize):
- res = len(points_2d_closed_refined_skeletonize)
- dx = np.min(points_2d_closed_refined_skeletonize[:, 0])
- dy = np.min(points_2d_closed_refined_skeletonize[:, 1])
-
- maxx = np.max(points_2d_closed_refined_skeletonize[:, 0])
- maxy = np.max(points_2d_closed_refined_skeletonize[:, 1])
-
- scale = max(maxx - dx, maxy - dy)
- factor = res
-
- px = (points_2d_closed_refined_skeletonize[:, 0] - dx) / scale * factor
- py = (points_2d_closed_refined_skeletonize[:, 1] - dy) / scale * factor
-
- polygon = np.stack((px, py)).T
- image_size = (res, res) # Image size
- midline, img = compute_midline(polygon, image_size)
-
- # Find midline points
- xx_idx, yy_idx = np.where(midline > 0)
- midline_points = np.column_stack((xx_idx, yy_idx))
-
- mxx = (midline_points[:, 0]) / factor * scale + dy
- myy = (midline_points[:, 1]) / factor * scale + dx
-
- midline_skeletonize = np.stack([myy, mxx]).T
-
- return midline_skeletonize
-
-
-
-def compute_midline(polygon, image_size):
- # Convert polygon to binary image
- binary_img = polygon_to_binary_image(polygon, image_size)
-
- # Apply skeletonization
- skeleton = skeletonize(binary_img, method='zhang')
-
- return skeleton, binary_img
-
def pointcloud_to_profile(points, res):
tck, u = splprep(points.T, u=None, s=0.0, per=1, k=3)
--
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