diff --git a/ntrfc/.editorconfig b/.editorconfig similarity index 100% rename from ntrfc/.editorconfig rename to .editorconfig diff --git a/ntrfc/.gitignore b/.gitignore similarity index 98% rename from ntrfc/.gitignore rename to .gitignore index 4c915d144e4439679f75a551bbfc014439e8fa0a..c5cb08d44e19ced01407866ef3fedc38ffb1de94 100644 --- a/ntrfc/.gitignore +++ b/.gitignore @@ -104,3 +104,4 @@ ENV/ # IDE settings .vscode/ .idea/ +/.snakemake/ diff --git a/ntrfc/.travis.yml b/.travis.yml similarity index 100% rename from ntrfc/.travis.yml rename to .travis.yml diff --git a/ntrfc/AUTHORS.rst b/AUTHORS.rst similarity index 100% rename from ntrfc/AUTHORS.rst rename to AUTHORS.rst diff --git a/ntrfc/CONTRIBUTING.rst b/CONTRIBUTING.rst similarity index 100% rename from ntrfc/CONTRIBUTING.rst rename to CONTRIBUTING.rst diff --git a/ntrfc/HISTORY.rst b/HISTORY.rst similarity index 100% rename from ntrfc/HISTORY.rst rename to HISTORY.rst diff --git a/ntrfc/LICENSE b/LICENSE similarity index 100% rename from ntrfc/LICENSE rename to LICENSE diff --git a/ntrfc/MANIFEST.in b/MANIFEST.in similarity index 100% rename from ntrfc/MANIFEST.in rename to MANIFEST.in diff --git a/ntrfc/Makefile b/Makefile similarity index 100% rename from ntrfc/Makefile rename to Makefile diff --git a/ntrfc/README.rst b/README.rst similarity index 93% rename from ntrfc/README.rst rename to README.rst index 0d088297a14f1348d386d294041a6cca9e7c235c..bfc4fd08ad96be25c6f33c7ff01754778c6cb3b1 100644 --- a/ntrfc/README.rst +++ b/README.rst @@ -27,6 +27,8 @@ Installation install using 'pip install ntrfc' or install using 'python -m setup install' +use 'pip install -v requirements_dev' to install development-packages + Features -------- diff --git a/ntrfc/docs/Makefile b/docs/Makefile similarity index 100% rename from ntrfc/docs/Makefile rename to docs/Makefile diff --git a/ntrfc/docs/authors.rst b/docs/authors.rst similarity index 100% rename from ntrfc/docs/authors.rst rename to docs/authors.rst diff --git a/ntrfc/docs/conf.py b/docs/conf.py similarity index 100% rename from ntrfc/docs/conf.py rename to docs/conf.py diff --git a/ntrfc/docs/contributing.rst b/docs/contributing.rst similarity index 100% rename from ntrfc/docs/contributing.rst rename to docs/contributing.rst diff --git a/ntrfc/docs/history.rst b/docs/history.rst similarity index 100% rename from ntrfc/docs/history.rst rename to docs/history.rst diff --git a/ntrfc/docs/index.rst b/docs/index.rst similarity index 100% rename from ntrfc/docs/index.rst rename to docs/index.rst diff --git a/ntrfc/docs/installation.rst b/docs/installation.rst similarity index 100% rename from ntrfc/docs/installation.rst rename to docs/installation.rst diff --git a/ntrfc/docs/make.bat b/docs/make.bat similarity index 100% rename from ntrfc/docs/make.bat rename to docs/make.bat diff --git a/ntrfc/docs/readme.rst b/docs/readme.rst similarity index 100% rename from ntrfc/docs/readme.rst rename to docs/readme.rst diff --git a/ntrfc/docs/usage.rst b/docs/usage.rst similarity index 100% rename from ntrfc/docs/usage.rst rename to docs/usage.rst diff --git a/ntrfc/examples/gwk_compressor/00_resources/profile_pointcloud.txt b/examples/gwk_compressor/00_resources/profile_pointcloud.txt similarity index 100% rename from ntrfc/examples/gwk_compressor/00_resources/profile_pointcloud.txt rename to examples/gwk_compressor/00_resources/profile_pointcloud.txt diff --git a/ntrfc/examples/seehausen_turbine/00_resources/profile_pointcloud.txt b/examples/seehausen_turbine/00_resources/profile_pointcloud.txt similarity index 100% rename from ntrfc/examples/seehausen_turbine/00_resources/profile_pointcloud.txt rename to examples/seehausen_turbine/00_resources/profile_pointcloud.txt diff --git a/ntrfc/ntrfc/__init__.py b/ntrfc/__init__.py similarity index 100% rename from ntrfc/ntrfc/__init__.py rename to ntrfc/__init__.py diff --git a/ntrfc/ntrfc/ntrfc.py b/ntrfc/ntrfc.py similarity index 100% rename from ntrfc/ntrfc/ntrfc.py rename to ntrfc/ntrfc.py diff --git a/ntrfc/ntrfc/postprocessing/__init__.py b/ntrfc/postprocessing/__init__.py similarity index 100% rename from ntrfc/ntrfc/postprocessing/__init__.py rename to ntrfc/postprocessing/__init__.py diff --git a/ntrfc/ntrfc/preprocessing/__init__.py b/ntrfc/preprocessing/__init__.py similarity index 100% rename from ntrfc/ntrfc/preprocessing/__init__.py rename to ntrfc/preprocessing/__init__.py diff --git a/ntrfc/ntrfc/preprocessing/case_creation/__init__.py b/ntrfc/preprocessing/case_creation/__init__.py similarity index 100% rename from ntrfc/ntrfc/preprocessing/case_creation/__init__.py rename to ntrfc/preprocessing/case_creation/__init__.py diff --git a/ntrfc/ntrfc/preprocessing/geometry_creation/__init__.py b/ntrfc/preprocessing/geometry_creation/__init__.py similarity index 100% rename from ntrfc/ntrfc/preprocessing/geometry_creation/__init__.py rename to ntrfc/preprocessing/geometry_creation/__init__.py diff --git a/ntrfc/ntrfc/preprocessing/mesh_creation/__init__.py b/ntrfc/preprocessing/mesh_creation/__init__.py similarity index 100% rename from ntrfc/ntrfc/preprocessing/mesh_creation/__init__.py rename to ntrfc/preprocessing/mesh_creation/__init__.py diff --git a/ntrfc/ntrfc/utils/__init__.py b/ntrfc/utils/__init__.py similarity index 100% rename from ntrfc/ntrfc/utils/__init__.py rename to ntrfc/utils/__init__.py diff --git a/ntrfc/ntrfc/utils/geometry/__init__.py b/ntrfc/utils/geometry/__init__.py similarity index 100% rename from ntrfc/ntrfc/utils/geometry/__init__.py rename to ntrfc/utils/geometry/__init__.py diff --git a/ntrfc/ntrfc/utils/math/__init__.py b/ntrfc/utils/math/__init__.py similarity index 100% rename from ntrfc/ntrfc/utils/math/__init__.py rename to ntrfc/utils/math/__init__.py diff --git a/ntrfc/requirements.txt b/requirements.txt similarity index 100% rename from ntrfc/requirements.txt rename to requirements.txt diff --git a/ntrfc/requirements_dev.txt b/requirements_dev.txt similarity index 92% rename from ntrfc/requirements_dev.txt rename to requirements_dev.txt index 2444893938b105c6adc0c15fce23ead647215265..ba01a8cc6b8163286a3365ab9ca933b201a10a49 100644 --- a/ntrfc/requirements_dev.txt +++ b/requirements_dev.txt @@ -1,4 +1,4 @@ -pip==19.2.3 +pip=21.3.1 pytest==6.2.4 snakemake==6.12.3 matplotlib==3.3.4 diff --git a/ntrfc/setup.cfg b/setup.cfg similarity index 100% rename from ntrfc/setup.cfg rename to setup.cfg diff --git a/ntrfc/setup.py b/setup.py similarity index 100% rename from ntrfc/setup.py rename to setup.py diff --git a/ntrfc/snakepipes/animationcase_creation/Snakefile b/snakepipes/animationcase_creation/Snakefile similarity index 100% rename from ntrfc/snakepipes/animationcase_creation/Snakefile rename to snakepipes/animationcase_creation/Snakefile diff --git a/ntrfc/snakepipes/case_creation/Snakefile b/snakepipes/case_creation/Snakefile similarity index 100% rename from ntrfc/snakepipes/case_creation/Snakefile rename to snakepipes/case_creation/Snakefile diff --git a/ntrfc/snakepipes/geometry_creation/Snakefile b/snakepipes/geometry_creation/Snakefile similarity index 100% rename from ntrfc/snakepipes/geometry_creation/Snakefile rename to snakepipes/geometry_creation/Snakefile diff --git a/ntrfc/snakepipes/mesh_creation/Snakefile b/snakepipes/mesh_creation/Snakefile similarity index 100% rename from ntrfc/snakepipes/mesh_creation/Snakefile rename to snakepipes/mesh_creation/Snakefile diff --git a/ntrfc/snakepipes/postprocessing/Snakefile b/snakepipes/postprocessing/Snakefile similarity index 100% rename from ntrfc/snakepipes/postprocessing/Snakefile rename to snakepipes/postprocessing/Snakefile diff --git a/ntrfc/tests/__init__.py b/tests/__init__.py similarity index 100% rename from ntrfc/tests/__init__.py rename to tests/__init__.py diff --git a/ntrfc/tests/test_ntrfc.py b/tests/test_ntrfc.py similarity index 100% rename from ntrfc/tests/test_ntrfc.py rename to tests/test_ntrfc.py diff --git a/ntrfc/tests/test_ntrfc_case.py b/tests/test_ntrfc_case.py similarity index 100% rename from ntrfc/tests/test_ntrfc_case.py rename to tests/test_ntrfc_case.py diff --git a/ntrfc/tests/test_ntrfc_geometry.py b/tests/test_ntrfc_geometry.py similarity index 100% rename from ntrfc/tests/test_ntrfc_geometry.py rename to tests/test_ntrfc_geometry.py diff --git a/ntrfc/tests/test_ntrfc_job.py b/tests/test_ntrfc_job.py similarity index 100% rename from ntrfc/tests/test_ntrfc_job.py rename to tests/test_ntrfc_job.py diff --git a/ntrfc/tests/test_ntrfc_math.py b/tests/test_ntrfc_math.py similarity index 100% rename from ntrfc/tests/test_ntrfc_math.py rename to tests/test_ntrfc_math.py diff --git a/ntrfc/tox.ini b/tox.ini similarity index 100% rename from ntrfc/tox.ini rename to tox.ini