diff --git a/workflows/case_creation/Snakefile b/workflows/case_creation/Snakefile index 7939c9e58282c1cce4f3bd497213d732e6d49517..0800c7fbbf61214d191abab34aab1d5c3e5a47dd 100644 --- a/workflows/case_creation/Snakefile +++ b/workflows/case_creation/Snakefile @@ -12,7 +12,6 @@ PARAMS = pd.read_csv("caseparams.tsv",sep="\t") def validate_configuration(config): validate(config,"config.schema.yaml") - # todo: the next line is not working. currently TEMPLATE.schema does not have the right format validate(PARAMS, TEMPLATE.schema) paramspace = Paramspace(PARAMS) return paramspace, config @@ -42,7 +41,5 @@ rule create_case: from ntrfc.preprocessing.case_creation.create_case import create_case from ntrfc.utils.dictionaries.dict_utils import merge - print(params["simparams"]) - print(config["case_options"]) simconfig = merge(params["simparams"],config["case_options"]) create_case(input,output,params["case_type"],simconfig)